Cottage Cheese Protein Pasta Bake

Featured in: Oven-Made Comforts

Get ready for a bubbling, golden pasta bake that's loaded with protein. Lean ground beef simmers in a seasoned tomato sauce with aromatic onions and garlic, then gets tossed with perfectly cooked penne and whipped cottage cheese. Everything gets layered into a baking dish, topped with mozzarella, and baked until the edges turn golden and cheese bubbles up. The result is pure comfort—creamy, hearty, and satisfying enough to feed a hungry family.

Updated on Sun, 01 Feb 2026 13:31:00 GMT
Cottage Cheese Protein Pasta Bake with Ground Beef, bubbling with golden mozzarella and rich tomato sauce, served hot and gooey from the oven. Pin It
Cottage Cheese Protein Pasta Bake with Ground Beef, bubbling with golden mozzarella and rich tomato sauce, served hot and gooey from the oven. | happysfenj.com

The smell of browned beef and garlic hit me the moment I walked into my neighbor's kitchen on a rainy Tuesday. She was pulling a bubbling casserole from the oven, cheese stretching like golden threads across the top. I asked what it was, and she laughed, saying it was just leftover pasta mixed with cottage cheese and whatever she had in the fridge. That offhand comment stuck with me, and by the weekend I was recreating it in my own kitchen, tweaking the spices and layering in more protein until it became this impossibly comforting bake that my family requests every other week.

I made this for my teenage son's track team after a Saturday meet, doubling the recipe and baking it in two huge pans. They demolished both in under twenty minutes, scraping the edges for every last cheesy bit. One kid asked if I ran a restaurant, and I realized then that simple, hearty food cooked with intention always wins over fancy plating. It became my go-to whenever I need to feed a crowd without spending hours in the kitchen.

Ingredients

  • Penne or rigatoni: Their tubular shape traps the sauce and cheese inside every bite, and cooking them just shy of al dente prevents mushiness after baking.
  • Lean ground beef: Choose 85% lean or higher to keep the dish hearty but not greasy, and always drain excess fat after browning for a cleaner sauce.
  • Low-fat cottage cheese: This is the secret protein boost that turns creamy and mild as it bakes, blending seamlessly with the tomato sauce.
  • Parmesan cheese: Adds a nutty, salty depth that balances the sweetness of the tomatoes and binds everything together.
  • Part-skim mozzarella cheese: Dividing it between the mixture and the topping ensures gooey pockets inside and that irresistible golden crust on top.
  • Yellow onion: Finely chopped so it melts into the sauce, adding natural sweetness and a savory base without chunky bites.
  • Garlic: Freshly minced releases aromatic oils that perfume the beef and make your kitchen smell like an Italian grandmother is cooking.
  • Crushed tomatoes: They create a thick, rustic sauce that clings to the pasta better than whole or diced tomatoes would.
  • Tomato paste: Coating the beef in paste before adding liquid intensifies the umami and deepens the color to a rich burgundy.
  • Beef broth or water: Loosens the sauce just enough to coat every piece of pasta without making the bake soupy.
  • Olive oil: A tablespoon is all you need to sauté the aromatics and keep them from sticking.
  • Dried oregano and basil: These dried herbs bloom in the simmering sauce, releasing their earthy, slightly sweet flavors throughout.
  • Red pepper flakes: Optional but wonderful for a gentle warmth that lingers on the back of your tongue.
  • Salt and black pepper: Season generously at every stage to build layers of flavor rather than trying to fix it at the end.
  • Fresh parsley or basil: A bright, herby finish that cuts through the richness and makes the dish look like it came from a magazine.

Instructions

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Prep the oven and dish:
Set your oven to 375°F and lightly grease a 9×13-inch baking dish so the edges don't stick. This step takes seconds but saves you from scrubbing later.
Boil the pasta:
Cook your penne or rigatoni in salted water until just shy of tender, about 1 to 2 minutes less than the box says. It will finish cooking in the oven, so underdone is better than mushy.
Sauté the aromatics:
Heat olive oil in a large skillet and cook the chopped onion until it turns translucent and soft, then add the garlic and stir for 30 seconds until your kitchen smells amazing. Don't let the garlic brown or it will taste bitter.
Brown the beef:
Add the ground beef, breaking it into small crumbles with your spoon, and cook until no pink remains. Drain any excess fat if there's more than a tablespoon pooling in the pan.
Build the sauce:
Stir in the tomato paste to coat every bit of beef, then pour in the crushed tomatoes and broth. Season with oregano, basil, red pepper flakes, salt, and pepper, then simmer on low for 8 to 10 minutes, stirring now and then.
Combine pasta and sauce:
In a large bowl, toss the drained pasta with the beef sauce, cottage cheese, Parmesan, and half the mozzarella until everything is evenly coated. The cottage cheese will look a little clumpy, but it melts beautifully in the oven.
Assemble the bake:
Spread the mixture into your prepared dish and scatter the remaining mozzarella across the top. Try to cover the surface evenly so every spoonful gets a cheesy, golden edge.
Bake until bubbly:
Slide the dish into the oven and bake for 20 to 25 minutes, watching for the cheese to melt, bubble, and turn golden at the edges. If you want extra color, switch to broil for the last minute, but watch it closely.
Rest and garnish:
Let the bake sit for 5 minutes after you pull it out so the sauce thickens slightly and you don't burn your mouth. Sprinkle fresh parsley or basil over the top before serving for a pop of color and freshness.
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Steaming Cottage Cheese Protein Pasta Bake with Ground Beef in a casserole dish, featuring penne, beefy tomato sauce, and fresh parsley garnish. Pin It
Steaming Cottage Cheese Protein Pasta Bake with Ground Beef in a casserole dish, featuring penne, beefy tomato sauce, and fresh parsley garnish. | happysfenj.com

One evening, I served this to a friend who swore she hated cottage cheese, and she ate two helpings before I told her what was in it. She looked at me in disbelief, then laughed and admitted she couldn't even taste it separately, just this creamy, rich comfort that made the whole dish feel indulgent. That moment taught me that ingredients transform when you treat them right, and sometimes the best surprises come from trusting the process instead of sticking to old assumptions.

Make It Your Own

Swap the ground beef for turkey or chicken if you want something lighter, or toss in a couple cups of fresh spinach or diced bell peppers when you mix the pasta for extra vegetables without changing the texture. I've added frozen peas straight from the bag, and they thaw perfectly in the oven while adding little bursts of sweetness. If someone in your house needs gluten-free pasta, use that instead and nobody will notice the difference once it's baked under all that cheese and sauce.

Storing and Reheating

This bake keeps beautifully in an airtight container in the fridge for up to three days, and I've found that reheating individual portions in the microwave with a damp paper towel on top keeps the pasta from drying out. If you're reheating the whole dish, cover it with foil and warm it in a 350°F oven for about 20 minutes, then uncover for the last 5 to crisp up the cheese again. You can also assemble the entire casserole the night before, cover it tightly, and refrigerate it until you're ready to bake, which makes weeknight dinners feel like magic.

Serving Suggestions

I like to serve this with a simple green salad dressed in lemon and olive oil to cut through the richness, or garlic bread if I'm feeling indulgent and want to soak up every bit of sauce. A glass of red wine or sparkling water with a squeeze of lime makes it feel like a proper dinner party, even if it's just a Tuesday. Sometimes I'll roast a tray of broccoli or green beans alongside it in the oven so everything finishes at the same time and I don't have to hover over the stove.

  • Pair it with a crisp Caesar salad or roasted vegetables for a balanced plate.
  • Serve with crusty bread to scoop up the cheesy edges that stick to the pan.
  • Offer grated Parmesan and red pepper flakes at the table so everyone can adjust the flavor to their liking.
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Hearty Cottage Cheese Protein Pasta Bake with Ground Beef plated with a fork, showcasing creamy cottage cheese, bubbling mozzarella, and al dente pasta. Pin It
Hearty Cottage Cheese Protein Pasta Bake with Ground Beef plated with a fork, showcasing creamy cottage cheese, bubbling mozzarella, and al dente pasta. | happysfenj.com

This pasta bake has become the dish I make when I want my house to smell like home and my family to gather around the table without me stressing in the kitchen. It's proof that comfort food can be nourishing, delicious, and simple all at once.

Recipe FAQs

Can I make this ahead of time?

Absolutely. Assemble everything in the baking dish, cover tightly, and refrigerate overnight. Add 5-10 minutes to the baking time when cooking from cold.

What other cheeses work well?

Ricotta can replace cottage cheese for a smoother texture. Try provolone or gouda mixed with the mozzarella for a sharper, smokier flavor.

How do I prevent the pasta from getting mushy?

Cook the pasta 1-2 minutes less than the package directs. It finishes cooking in the oven and absorbs sauce without becoming too soft.

Can I freeze leftovers?

Yes. Portion cooled leftovers into airtight containers and freeze up to 3 months. Thaw overnight and reheat covered at 350°F until hot throughout.

What can I add for extra nutrition?

Fold in fresh spinach, diced bell peppers, or zucchini with the sauce. The vegetables blend seamlessly and boost fiber and vitamins.

Cottage Cheese Protein Pasta Bake

Creamy pasta bake with seasoned ground beef, tomatoes, cottage cheese, and melted mozzarella bubbling to golden perfection.

Prep Time
20 minutes
Time to Cook
45 minutes
Overall Time
65 minutes
Created by Lily Hudson

Recipe Type Oven-Made Comforts

Skill Level Medium

Cuisine Type American-Italian

Makes 6 Number of Servings

Diet Preferences None specified

What You Need

Pasta

01 12 ounces penne or rigatoni pasta

Meat & Dairy

01 1 pound lean ground beef (85% lean or higher)
02 1 cup low-fat cottage cheese
03 ½ cup grated Parmesan cheese
04 1 cup shredded part-skim mozzarella cheese, divided

Vegetables & Aromatics

01 1 medium yellow onion, finely chopped (approximately 1 cup)
02 2 cloves garlic, minced (approximately 2 teaspoons)

Sauce

01 1 can (14 ounces) crushed tomatoes
02 1 can (6 ounces) tomato paste
03 ½ cup beef broth or water

Pantry & Spices

01 1 tablespoon olive oil
02 1 teaspoon dried oregano
03 1 teaspoon dried basil
04 ½ teaspoon red pepper flakes (optional)
05 Salt and freshly ground black pepper to taste

Garnish

01 Fresh parsley or basil leaves for garnish

Step-by-Step

Step 01

Prepare Baking Dish and Preheat Oven: Preheat the oven to 375°F. Lightly grease a 9×13-inch baking dish with cooking spray or oil.

Step 02

Cook Pasta: Bring a large pot of salted water to a boil. Cook the pasta until just al dente, approximately 1-2 minutes less than package directions. Drain and set aside.

Step 03

Sauté Aromatics: Heat olive oil in a large skillet over medium heat. Add onion and sauté until translucent, 3-4 minutes. Stir in garlic and cook for 30 seconds until fragrant.

Step 04

Brown Ground Beef: Add ground beef, breaking it into small pieces. Cook until browned and no longer pink, 6-8 minutes. Drain excess fat if desired.

Step 05

Develop Sauce: Stir in tomato paste to coat the beef. Add crushed tomatoes and beef broth. Mix in oregano, basil, red pepper flakes if using, salt, and pepper. Simmer on low for 8-10 minutes, stirring occasionally.

Step 06

Combine Mixture: In a large bowl, combine drained pasta, beef-tomato sauce, cottage cheese, Parmesan, and half of the mozzarella. Toss gently until evenly mixed.

Step 07

Assemble Bake: Spread the mixture into the prepared baking dish. Sprinkle the remaining mozzarella over the top.

Step 08

Bake Until Golden: Bake for 20-25 minutes, or until the cheese is melted, bubbly, and golden at the edges.

Step 09

Rest and Serve: Remove from oven and let rest for 5 minutes. Garnish with chopped parsley or basil before serving.

Tools Needed

  • Large pot
  • Large skillet
  • Mixing bowl
  • 9×13-inch baking dish
  • Wooden spoon or spatula
  • Colander

Allergy Details

Always check ingredients for allergens. Not sure? Ask your doctor.
  • Contains wheat (pasta)
  • Contains milk (cottage cheese, Parmesan, mozzarella)
  • May contain soy (check cheese and pasta labels)
  • Always check ingredient labels for hidden allergens

Nutrition (per portion)

Numbers here are for information, not as health advice.
  • Caloric Value: 575
  • Fat Content: 20 g
  • Carbohydrates: 56 g
  • Protein Amount: 41 g